Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | GJW30_RS03105 | Not Available | Negative | 627353 - 627646 | 10961.3 |
| type ii toxin-antitoxin system pard family antitoxin | GJW30_RS03110 | Not Available | Negative | 627639 - 627896 | 9587.58 |
| thiamine pyrophosphate-binding protein | GJW30_RS03115 | Not Available | Negative | 627963 - 629690 | 61222.2 |
| trap transporter large permease | GJW30_RS03120 | Not Available | Negative | 629701 - 630987 | 44929.2 |
| trap transporter small permease | GJW30_RS03125 | Not Available | Negative | 630984 - 631520 | 19680.4 |
| dctp family trap transporter solute-binding subunit | GJW30_RS03130 | Not Available | Negative | 631662 - 632681 | 36474.1 |
| alpha-ketoacid dehydrogenase subunit beta | GJW30_RS03135 | Not Available | Negative | 632693 - 633667 | 34901.0 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | GJW30_RS03140 | Not Available | Negative | 633667 - 634650 | 35003.8 |
| hypothetical protein | GJW30_RS03145 | Not Available | Positive | 634911 - 635717 | 27297.7 |
| fad binding domain-containing protein | GJW30_RS03150 | Not Available | Positive | 635810 - 636679 | 30561.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
