Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing enzyme family protein | GJW30_RS02905 | Not Available | Negative | 584928 - 586067 | 40500.4 |
| hydroxyacid dehydrogenase | GJW30_RS02910 | Not Available | Negative | 586077 - 587024 | 33244.6 |
| mandelate racemase/muconate lactonizing enzyme family protein | GJW30_RS02915 | Not Available | Negative | 587024 - 588166 | 41863.5 |
| tripartite tricarboxylate transporter substrate binding protein | GJW30_RS02920 | Not Available | Negative | 588192 - 589169 | 34445.7 |
| gntr family transcriptional regulator | GJW30_RS02925 | Not Available | Positive | 589245 - 589943 | 25435.7 |
| hypothetical protein | GJW30_RS02930 | Not Available | Positive | 590045 - 590278 | 8838.52 |
| hypothetical protein | GJW30_RS02935 | Not Available | Positive | 590348 - 590695 | 13305.9 |
| hypothetical protein | GJW30_RS02940 | Not Available | Positive | 590777 - 591211 | 14935.9 |
| efflux rnd transporter periplasmic adaptor subunit | GJW30_RS02945 | Not Available | Positive | 591299 - 592936 | 58279.1 |
| efflux rnd transporter permease subunit | GJW30_RS02950 | Not Available | Positive | 592938 - 596075 | 113730.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
