Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hutd family protein | GJW30_RS22340 | Not Available | Negative | 4561265 - 4561834 | 20106.9 |
| urocanate hydratase | GJW30_RS22345 | Not Available | Negative | 4561835 - 4563541 | 62090.1 |
| mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunit | GJW30_RS22350 | Not Available | Positive | 4563665 - 4565167 | 53004.9 |
| mdtb/muxb family multidrug efflux rnd transporter permease subunit | GJW30_RS22355 | Not Available | Positive | 4565164 - 4568271 | 111621.0 |
| efflux rnd transporter permease subunit | GJW30_RS22360 | Not Available | Positive | 4568268 - 4571534 | 116389.0 |
| efflux transporter outer membrane subunit | GJW30_RS22365 | Not Available | Positive | 4571700 - 4573169 | 52523.9 |
| dj-1/pfpi family protein | GJW30_RS22370 | Not Available | Positive | 4573216 - 4574334 | 40276.6 |
| tagatose 1,6-diphosphate aldolase | GJW30_RS22375 | Not Available | Negative | 4574501 - 4575535 | 37832.5 |
| pfkb family carbohydrate kinase | GJW30_RS22380 | Not Available | Negative | 4575532 - 4576434 | 31253.0 |
| alcohol dehydrogenase catalytic domain-containing protein | GJW30_RS22385 | Not Available | Negative | 4576431 - 4577402 | 34969.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
