Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipyl-coa thiolase | GJW30_RS02095 | Not Available | Positive | 441910 - 443118 | 42269.0 |
| protocatechuate 3,4-dioxygenase subunit beta | GJW30_RS02100 | Not Available | Positive | 443212 - 443910 | 26030.7 |
| protocatechuate 3,4-dioxygenase subunit alpha | GJW30_RS02105 | Not Available | Positive | 443910 - 444497 | 20913.4 |
| giy-yig nuclease family protein | GJW30_RS02110 | Not Available | Positive | 444711 - 444947 | 8787.42 |
| caib/baif coa transferase family protein | GJW30_RS02115 | Not Available | Positive | 445074 - 446189 | 40217.5 |
| m48 family metallopeptidase | GJW30_RS02120 | Not Available | Negative | 446364 - 447137 | 29725.2 |
| polyhydroxyalkanoate depolymerase | GJW30_RS02125 | Not Available | Negative | 447445 - 448794 | 50296.1 |
| hit domain-containing protein | GJW30_RS02130 | Not Available | Positive | 449075 - 449503 | 15613.9 |
| nad(+) diphosphatase | GJW30_RS02135 | Not Available | Positive | 449804 - 450751 | 34914.7 |
| pfkb family carbohydrate kinase | GJW30_RS02140 | Not Available | Positive | 450738 - 451676 | 33006.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
