Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02300 family protein | GJW30_RS21315 | Not Available | Negative | 4348251 - 4348634 | 13701.3 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | GJW30_RS21320 | Not Available | Positive | 4348852 - 4350192 | 46777.5 |
| (d)cmp kinase | GJW30_RS21325 | Not Available | Positive | 4350189 - 4350824 | 22247.5 |
| 30s ribosomal protein s1 | GJW30_RS21335 | Not Available | Positive | 4351022 - 4352737 | 63233.5 |
| signal peptide peptidase sppa | GJW30_RS21340 | Not Available | Positive | 4352925 - 4353896 | 34734.0 |
| integration host factor subunit beta | GJW30_RS21345 | Not Available | Positive | 4353975 - 4354292 | 11863.9 |
| lipopolysaccharide assembly protein lapa domain-containing protein | GJW30_RS21350 | Not Available | Positive | 4354371 - 4354712 | 12632.0 |
| ornithine cyclodeaminase family protein | GJW30_RS21355 | Not Available | Positive | 4354712 - 4355665 | 33861.5 |
| amidohydrolase family protein | GJW30_RS21360 | Not Available | Positive | 4355767 - 4356882 | 41465.7 |
| phosphoribosylanthranilate isomerase | GJW30_RS21365 | Not Available | Positive | 4356925 - 4357569 | 22569.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
