Variibacter gotjawalensis strain GJW-30

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Variibacter

Description

Variibacter gotjawalensis strain GJW-30 is characterized by having a single replicon and is cataloged under the accession number NZ_AP014946.1. This specific strain is part of the Variibacter genus, which is known for its diverse metabolic capabilities. The presence of only one replicon suggests a streamlined genomic organization, which may facilitate efficient replication and stability of the genetic material within the strain. Such a genomic structure can often be advantageous for survival in various environments, potentially aiding the organism in adapting to specific ecological niches. Given that Variibacter species are typically associated with soil and aquatic systems, the ecological implications of strain GJW-30 may include its role in nutrient cycling and organic matter degradation. This strain could contribute to the microbial diversity in its habitat, influencing the overall health and functioning of the ecosystem it inhabits. In summary, Variibacter gotjawalensis strain GJW-30, with its single replicon, exemplifies a simplified genomic structure that may enhance its adaptability and ecological role within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusVariibacter
SpeciesVariibacter gotjawalensis
Strainstrain GJW-30

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variibacter gotjawalensis strain GJW-30 chromosome, complete

Gene Summary

Adenine Count

875345 bp

Thymine Count

856663 bp

Guanine Count

1397758 bp

Cytosine Count

1456471 bp

Genome Length

4586237 bp

Protein-coding Genes

4421 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1150 family proteinGJW30_RS21265Not AvailableNegative4337523 - 43377658561.15
hsp20 family proteinGJW30_RS21270Not AvailableNegative4337808 - 433824216058.2
antitoxin xre-like helix-turn-helix domain-containing proteinGJW30_RS23055Not AvailablePositive4338512 - 433895516095.3
res family nad+ phosphorylaseGJW30_RS21280Not AvailablePositive4338952 - 433962924490.1
sn-glycerol-3-phosphate import atp-binding protein ugpcGJW30_RS21285Not AvailableNegative4339626 - 434067838069.5
sn-glycerol-3-phosphate abc transporter permease ugpeGJW30_RS21290Not AvailableNegative4340679 - 434152731732.7
sn-glycerol-3-phosphate abc transporter permease ugpaGJW30_RS21295Not AvailableNegative4341562 - 434244032565.2
sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpbGJW30_RS21300Not AvailableNegative4342633 - 434395248078.9
tetratricopeptide repeat proteinGJW30_RS21305Not AvailablePositive4344137 - 4348033142614.0
Trna-alaNot AvailableNot AvailablePositive4348097 - 4348172Not Available

Displaying genes 4261 – 4270 of 4489 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.