Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | GJW30_RS20565 | Not Available | Positive | 4201268 - 4202323 | 39275.0 |
| abc transporter atp-binding protein | GJW30_RS20570 | Not Available | Positive | 4202490 - 4203596 | 40009.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | GJW30_RS20575 | Not Available | Negative | 4203811 - 4204785 | 33933.6 |
| s9 family peptidase | GJW30_RS20580 | Not Available | Positive | 4204887 - 4206818 | 69750.0 |
| thiamine pyrophosphate-dependent enzyme | GJW30_RS20585 | Not Available | Negative | 4206983 - 4207549 | 19991.1 |
| thiamine pyrophosphate-binding protein | GJW30_RS20590 | Not Available | Negative | 4207588 - 4208130 | 19436.9 |
| hydroxyacid dehydrogenase | GJW30_RS20595 | Not Available | Positive | 4208235 - 4209284 | 38136.9 |
| cupin domain-containing protein | GJW30_RS20600 | Not Available | Negative | 4209285 - 4209872 | 21573.3 |
| sdr family oxidoreductase | GJW30_RS20605 | Not Available | Positive | 4210034 - 4210759 | 26049.3 |
| 2-hydroxychromene-2-carboxylate isomerase | GJW30_RS20610 | Not Available | Positive | 4210771 - 4211388 | 22613.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
