Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | GJW30_RS20260 | Not Available | Negative | 4137188 - 4138405 | 43424.0 |
| winged helix-turn-helix transcriptional regulator | GJW30_RS20265 | Not Available | Positive | 4138598 - 4139650 | 39155.4 |
| abc transporter atp-binding protein | GJW30_RS20270 | Not Available | Positive | 4140268 - 4141350 | 39382.5 |
| abc transporter atp-binding protein | GJW30_RS20275 | Not Available | Positive | 4141347 - 4142429 | 38977.9 |
| carbohydrate abc transporter permease | GJW30_RS20280 | Not Available | Positive | 4142432 - 4143307 | 32422.4 |
| carbohydrate abc transporter permease | GJW30_RS20285 | Not Available | Positive | 4143310 - 4144101 | 29692.9 |
| duf2160 domain-containing protein | GJW30_RS20290 | Not Available | Positive | 4144101 - 4144412 | 11488.5 |
| abc transporter substrate-binding protein | GJW30_RS20295 | Not Available | Positive | 4144483 - 4146237 | 65710.6 |
| glutathione s-transferase family protein | GJW30_RS20300 | Not Available | Positive | 4146326 - 4147042 | 27210.8 |
| hypothetical protein | GJW30_RS20305 | Not Available | Negative | 4147130 - 4147366 | 8467.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
