Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | GJW30_RS19965 | Not Available | Positive | 4074132 - 4074863 | 27463.0 |
| acyl-homoserine-lactone synthase | GJW30_RS19970 | Not Available | Positive | 4074943 - 4075572 | 24085.0 |
| hypothetical protein | GJW30_RS19975 | Not Available | Negative | 4075623 - 4075802 | 6792.26 |
| nad-dependent epimerase/dehydratase family protein | GJW30_RS19980 | Not Available | Positive | 4075953 - 4076924 | 34517.0 |
| sdr family oxidoreductase | GJW30_RS19985 | Not Available | Positive | 4076921 - 4077682 | 26116.0 |
| fad/nad(p)-binding protein | GJW30_RS19990 | Not Available | Positive | 4077679 - 4079112 | 52607.7 |
| abc transporter substrate-binding protein | GJW30_RS19995 | Not Available | Positive | 4079184 - 4080791 | 59093.6 |
| abc transporter permease | GJW30_RS20000 | Not Available | Positive | 4080796 - 4081827 | 36623.6 |
| abc transporter permease | GJW30_RS20005 | Not Available | Positive | 4081824 - 4082672 | 29998.5 |
| nickel abc transporter atp-binding protein nike | GJW30_RS20010 | Not Available | Positive | 4082672 - 4084348 | 60565.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
