Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage portal protein | GJW30_RS18915 | Not Available | Negative | 3846427 - 3847599 | 42425.5 |
| dna-packaging protein | GJW30_RS18920 | Not Available | Negative | 3847846 - 3849081 | 44999.9 |
| hypothetical protein | GJW30_RS18925 | Not Available | Negative | 3849068 - 3849610 | 20102.7 |
| lytic transglycosylase domain-containing protein | GJW30_RS18930 | Not Available | Negative | 3849764 - 3850567 | 29167.8 |
| duf3617 domain-containing protein | GJW30_RS18935 | Not Available | Positive | 3850739 - 3851170 | 14945.9 |
| gnat family n-acetyltransferase | GJW30_RS18940 | Not Available | Negative | 3851167 - 3851433 | 9803.88 |
| 3-carboxy-cis,cis-muconate cycloisomerase | GJW30_RS18945 | Not Available | Positive | 3851515 - 3852864 | 48680.3 |
| alpha-hydroxy acid oxidase | GJW30_RS18950 | Not Available | Negative | 3853012 - 3854151 | 41290.1 |
| abc transporter atp-binding protein | GJW30_RS18955 | Not Available | Negative | 3854229 - 3854903 | 24126.6 |
| abc transporter atp-binding protein | GJW30_RS18960 | Not Available | Negative | 3854905 - 3855648 | 26743.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
