Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur oxidation c-type cytochrome soxa | GJW30_RS17680 | Not Available | Positive | 3618017 - 3618793 | 28542.8 |
| sensor histidine kinase | GJW30_RS17685 | Not Available | Negative | 3619039 - 3620271 | 44945.2 |
| response regulator | GJW30_RS17690 | Not Available | Negative | 3620271 - 3620957 | 25212.5 |
| duf1772 domain-containing protein | GJW30_RS17695 | Not Available | Negative | 3620954 - 3621532 | 20409.0 |
| spy/cpxp family protein refolding chaperone | GJW30_RS17700 | Not Available | Negative | 3621581 - 3622174 | 21954.2 |
| duf4239 domain-containing protein | GJW30_RS17705 | Not Available | Negative | 3622271 - 3623056 | 29194.8 |
| dipeptidase | GJW30_RS17710 | Not Available | Positive | 3623164 - 3624324 | 42132.4 |
| hypothetical protein | GJW30_RS17715 | Not Available | Negative | 3624438 - 3624743 | 11850.0 |
| carboxymuconolactone decarboxylase family protein | GJW30_RS17720 | Not Available | Negative | 3624757 - 3625149 | 14306.2 |
| aminotransferase class v-fold plp-dependent enzyme | GJW30_RS17725 | Not Available | Negative | 3625159 - 3626310 | 41377.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
