Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | GJW30_RS17480 | Not Available | Positive | 3577255 - 3579129 | 68026.4 |
| hypothetical protein | GJW30_RS17485 | Not Available | Negative | 3579199 - 3579705 | 17429.0 |
| hypothetical protein | GJW30_RS17490 | Not Available | Positive | 3579938 - 3580210 | 9483.75 |
| dna polymerase iii subunit chi | GJW30_RS17495 | Not Available | Negative | 3580260 - 3580712 | 16712.5 |
| leucyl aminopeptidase | GJW30_RS17500 | Not Available | Negative | 3580724 - 3582214 | 52828.1 |
| lps export abc transporter permease lptf | GJW30_RS17505 | Not Available | Positive | 3582428 - 3583609 | 42909.6 |
| lps export abc transporter permease lptg | GJW30_RS17510 | Not Available | Positive | 3583606 - 3584691 | 39446.5 |
| lps-assembly protein lptd | GJW30_RS17515 | Not Available | Positive | 3584691 - 3587195 | 92815.3 |
| sura n-terminal domain-containing protein | GJW30_RS17520 | Not Available | Positive | 3587226 - 3588146 | 33334.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | GJW30_RS17525 | Not Available | Positive | 3588143 - 3589174 | 36158.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
