Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein cpab | GJW30_RS01650 | Not Available | Negative | 358021 - 358806 | 27837.7 |
| prepilin peptidase | GJW30_RS01655 | Not Available | Negative | 358945 - 359451 | 18174.9 |
| flp family type ivb pilin | GJW30_RS01660 | Not Available | Negative | 359477 - 359638 | 5639.98 |
| flp family type ivb pilin | GJW30_RS01665 | Not Available | Negative | 359784 - 359948 | 5505.89 |
| pilus assembly protein n-terminal domain-containing protein | GJW30_RS01670 | Not Available | Positive | 360419 - 360883 | 15953.2 |
| tade/tadg family type iv pilus assembly protein | GJW30_RS01675 | Not Available | Positive | 361012 - 361686 | 24719.6 |
| tade/tadg family type iv pilus assembly protein | GJW30_RS01680 | Not Available | Positive | 361740 - 362294 | 20143.4 |
| doxx family protein | GJW30_RS01685 | Not Available | Positive | 362384 - 362785 | 14549.0 |
| glucokinase | GJW30_RS01690 | Not Available | Negative | 362782 - 363723 | 33184.1 |
| n-acyl homoserine lactonase family protein | GJW30_RS01695 | Not Available | Negative | 363735 - 364529 | 29557.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
