Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | GJW30_RS17040 | Not Available | Negative | 3491859 - 3493067 | 42754.5 |
| hypothetical protein | GJW30_RS17045 | Not Available | Negative | 3493326 - 3493607 | 10225.3 |
| penicillin-binding protein 1a | GJW30_RS17050 | Not Available | Negative | 3493775 - 3496288 | 91896.8 |
| n-acetylmuramoyl-l-alanine amidase | GJW30_RS17055 | Not Available | Negative | 3496492 - 3497676 | 42520.7 |
| ribonuclease e/g | GJW30_RS17060 | Not Available | Positive | 3498307 - 3501471 | 117540.0 |
| polyhydroxyalkanoate depolymerase | GJW30_RS17065 | Not Available | Negative | 3501723 - 3502937 | 44877.1 |
| glutathione s-transferase family protein | GJW30_RS17070 | Not Available | Positive | 3503116 - 3503772 | 24338.2 |
| had family hydrolase | GJW30_RS17075 | Not Available | Negative | 3503769 - 3504425 | 23584.3 |
| pyridoxal phosphate-dependent aminotransferase | GJW30_RS17080 | Not Available | Negative | 3504422 - 3505600 | 42422.0 |
| dsba family protein | GJW30_RS17085 | Not Available | Positive | 3505856 - 3506620 | 27493.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
