Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c40 family peptidase | GJW30_RS01600 | Not Available | Negative | 347348 - 348202 | 30304.4 |
| marr family transcriptional regulator | GJW30_RS01605 | Not Available | Negative | 348199 - 348549 | 13056.3 |
| leucyl aminopeptidase family protein | GJW30_RS01610 | Not Available | Negative | 348621 - 350015 | 49772.9 |
| tetratricopeptide repeat protein | GJW30_RS01615 | Not Available | Positive | 350159 - 350962 | 29361.8 |
| type ii secretion system f family protein | GJW30_RS01620 | Not Available | Negative | 351055 - 352029 | 36268.8 |
| type ii secretion system f family protein | GJW30_RS01625 | Not Available | Negative | 352042 - 353022 | 35564.3 |
| atpase, t2ss/t4p/t4ss family | GJW30_RS01630 | Not Available | Negative | 353025 - 354485 | 53388.2 |
| aaa family atpase | GJW30_RS01635 | Not Available | Negative | 354571 - 355842 | 45513.7 |
| cpad family pilus assembly protein | GJW30_RS01640 | Not Available | Negative | 355839 - 356573 | 26483.7 |
| type ii and iii secretion system protein family protein | GJW30_RS01645 | Not Available | Negative | 356585 - 357991 | 48779.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
