Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | GJW30_RS16390 | Not Available | Negative | 3361944 - 3362330 | 14510.4 |
| duf4394 domain-containing protein | GJW30_RS16395 | Not Available | Negative | 3362793 - 3363587 | 26606.1 |
| ssra-binding protein smpb | GJW30_RS16400 | Not Available | Negative | 3363714 - 3364187 | 17907.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | GJW30_RS16405 | Not Available | Negative | 3364263 - 3365150 | 31242.7 |
| lytic transglycosylase domain-containing protein | GJW30_RS16410 | Not Available | Positive | 3365405 - 3367873 | 88651.6 |
| alpha/beta fold hydrolase | GJW30_RS16415 | Not Available | Positive | 3368010 - 3368873 | 31146.6 |
| porin | GJW30_RS16420 | Not Available | Negative | 3369016 - 3369921 | 31235.5 |
| glycosyltransferase family 2 protein | GJW30_RS16425 | Not Available | Negative | 3370024 - 3370980 | 35316.2 |
| Trna-ser | Not Available | Not Available | Positive | 3371292 - 3371385 | Not Available |
| hlyd family type i secretion periplasmic adaptor subunit | GJW30_RS16435 | Not Available | Negative | 3371448 - 3372743 | 47273.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
