Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase family protein | GJW30_RS15570 | Not Available | Negative | 3203602 - 3204684 | 40235.0 |
| transcriptional regulator ldtr | GJW30_RS15575 | Not Available | Negative | 3205078 - 3205593 | 20197.4 |
| 3-hydroxyisobutyrate dehydrogenase | GJW30_RS15580 | Not Available | Negative | 3205840 - 3206730 | 30130.4 |
| duf6163 family protein | GJW30_RS15585 | Not Available | Negative | 3206756 - 3207181 | 15047.5 |
| enoyl-coa hydratase/isomerase family protein | GJW30_RS15590 | Not Available | Negative | 3207178 - 3208218 | 37225.2 |
| tmem143 family protein | GJW30_RS15595 | Not Available | Negative | 3208280 - 3209587 | 49367.4 |
| acyl-coa dehydrogenase family protein | GJW30_RS15600 | Not Available | Negative | 3209594 - 3210733 | 41169.3 |
| porphobilinogen synthase | GJW30_RS15605 | Not Available | Positive | 3210833 - 3211897 | 39072.9 |
| threonine ammonia-lyase | GJW30_RS15610 | Not Available | Negative | 3212033 - 3213256 | 43588.4 |
| rdd family protein | GJW30_RS15615 | Not Available | Positive | 3213418 - 3213972 | 20617.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
