Variibacter gotjawalensis strain GJW-30

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Variibacter

Description

Variibacter gotjawalensis strain GJW-30 is characterized by having a single replicon and is cataloged under the accession number NZ_AP014946.1. This specific strain is part of the Variibacter genus, which is known for its diverse metabolic capabilities. The presence of only one replicon suggests a streamlined genomic organization, which may facilitate efficient replication and stability of the genetic material within the strain. Such a genomic structure can often be advantageous for survival in various environments, potentially aiding the organism in adapting to specific ecological niches. Given that Variibacter species are typically associated with soil and aquatic systems, the ecological implications of strain GJW-30 may include its role in nutrient cycling and organic matter degradation. This strain could contribute to the microbial diversity in its habitat, influencing the overall health and functioning of the ecosystem it inhabits. In summary, Variibacter gotjawalensis strain GJW-30, with its single replicon, exemplifies a simplified genomic structure that may enhance its adaptability and ecological role within its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusVariibacter
SpeciesVariibacter gotjawalensis
Strainstrain GJW-30

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variibacter gotjawalensis strain GJW-30 chromosome, complete

Gene Summary

Adenine Count

875345 bp

Thymine Count

856663 bp

Guanine Count

1397758 bp

Cytosine Count

1456471 bp

Genome Length

4586237 bp

Protein-coding Genes

4421 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2232 domain-containing proteinGJW30_RS15420Not AvailablePositive3172720 - 317367032976.4
50s ribosomal protein l9GJW30_RS15425Not AvailablePositive3173707 - 317430921943.1
hypothetical proteinGJW30_RS15430Not AvailableNegative3174306 - 317513627781.2
replicative dna helicaseGJW30_RS15435Not AvailablePositive3175458 - 317694854903.7
alanine racemaseGJW30_RS15440Not AvailablePositive3176987 - 317811139845.5
dna repair protein radaGJW30_RS15445Not AvailablePositive3178135 - 317957150218.1
cvpa family proteinGJW30_RS15450Not AvailablePositive3179678 - 318037925599.7
amidophosphoribosyltransferaseGJW30_RS15455Not AvailablePositive3180395 - 318186753987.5
sdr family nad(p)-dependent oxidoreductaseGJW30_RS15460Not AvailablePositive3181881 - 318262126051.4
ribosome biogenesis gtpase derGJW30_RS15465Not AvailableNegative3182625 - 318398349624.6

Displaying genes 3111 – 3120 of 4489 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.