Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tatd family hydrolase | GJW30_RS15020 | Not Available | Negative | 3091312 - 3092103 | 28919.3 |
| methionine--trna ligase | GJW30_RS15025 | Not Available | Negative | 3092117 - 3093670 | 57144.0 |
| dna polymerase iii subunit delta' | GJW30_RS15030 | Not Available | Negative | 3093704 - 3094708 | 36252.3 |
| dtmp kinase | GJW30_RS15035 | Not Available | Negative | 3094705 - 3095364 | 23407.0 |
| d-alanyl-d-alanine carboxypeptidase family protein | GJW30_RS15040 | Not Available | Negative | 3095372 - 3096559 | 42588.4 |
| septal ring lytic transglycosylase rlpa family protein | GJW30_RS15045 | Not Available | Negative | 3096660 - 3097406 | 26851.9 |
| outer membrane protein | GJW30_RS15050 | Not Available | Negative | 3097822 - 3098400 | 20325.1 |
| outer membrane protein | GJW30_RS15055 | Not Available | Negative | 3098568 - 3099293 | 25126.7 |
| abc transporter substrate-binding protein | GJW30_RS15060 | Not Available | Negative | 3099498 - 3100712 | 43295.1 |
| sensor domain-containing diguanylate cyclase | GJW30_RS15065 | Not Available | Positive | 3100917 - 3102125 | 43120.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
