Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | GJW30_RS01395 | Not Available | Negative | 305765 - 306394 | 21245.9 |
| hypothetical protein | GJW30_RS01400 | Not Available | Negative | 306479 - 306739 | 9524.65 |
| efflux rnd transporter permease subunit | GJW30_RS01405 | Not Available | Negative | 306940 - 310071 | 112670.0 |
| efflux rnd transporter periplasmic adaptor subunit | GJW30_RS01410 | Not Available | Negative | 310075 - 311166 | 38533.3 |
| tetr/acrr family transcriptional regulator | GJW30_RS01415 | Not Available | Negative | 311163 - 311795 | 23332.8 |
| duf1772 domain-containing protein | GJW30_RS01420 | Not Available | Negative | 311947 - 312372 | 15436.3 |
| class i sam-dependent methyltransferase | GJW30_RS01425 | Not Available | Negative | 312378 - 313001 | 22427.6 |
| fluoride efflux transporter crcb | GJW30_RS01430 | Not Available | Negative | 313174 - 313548 | 13215.4 |
| m20 family metallopeptidase | GJW30_RS01435 | Not Available | Negative | 313665 - 314792 | 40414.1 |
| m20 family metallopeptidase | GJW30_RS01440 | Not Available | Negative | 314961 - 316091 | 40406.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
