Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pha/phb synthase family protein | GJW30_RS14525 | Not Available | Negative | 2985753 - 2987558 | 67510.0 |
| hypothetical protein | GJW30_RS22845 | Not Available | Positive | 2987873 - 2988094 | 7901.34 |
| ll-diaminopimelate aminotransferase | GJW30_RS14535 | Not Available | Positive | 2988197 - 2989414 | 44458.6 |
| homoserine dehydrogenase | GJW30_RS14540 | Not Available | Positive | 2989442 - 2990758 | 45508.9 |
| class ii fructose-bisphosphatase | GJW30_RS14545 | Not Available | Positive | 2990765 - 2991763 | 35510.2 |
| single-stranded-dna-specific exonuclease recj | GJW30_RS14550 | Not Available | Positive | 2991797 - 2993632 | 64434.5 |
| lytic murein transglycosylase | GJW30_RS14555 | Not Available | Negative | 2993606 - 2994847 | 45985.8 |
| hypothetical protein | GJW30_RS14560 | Not Available | Negative | 2994892 - 2995206 | 11109.6 |
| abc transporter permease | GJW30_RS14565 | Not Available | Positive | 2995423 - 2996124 | 24646.0 |
| extracellular solute-binding protein | GJW30_RS14570 | Not Available | Negative | 2996121 - 2996948 | 30152.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
