Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | GJW30_RS12400 | Not Available | Positive | 2560558 - 2561073 | 18684.1 |
| trap transporter large permease | GJW30_RS12405 | Not Available | Positive | 2561070 - 2562356 | 45408.1 |
| sdr family nad(p)-dependent oxidoreductase | GJW30_RS12410 | Not Available | Negative | 2562378 - 2563118 | 24759.8 |
| tetr/acrr family transcriptional regulator | GJW30_RS12415 | Not Available | Positive | 2563314 - 2563820 | 17988.6 |
| amp-binding protein | GJW30_RS12420 | Not Available | Negative | 2563817 - 2565283 | 53780.3 |
| duf4112 domain-containing protein | GJW30_RS12425 | Not Available | Positive | 2565478 - 2565849 | 12878.0 |
| paqr family membrane homeostasis protein trha | GJW30_RS12430 | Not Available | Positive | 2565946 - 2566608 | 24292.5 |
| indolepyruvate ferredoxin oxidoreductase family protein | GJW30_RS12435 | Not Available | Positive | 2566904 - 2570386 | 126155.0 |
| atp-binding protein | GJW30_RS12440 | Not Available | Negative | 2570595 - 2572553 | 71317.5 |
| crp/fnr family transcriptional regulator | GJW30_RS12445 | Not Available | Positive | 2572776 - 2573450 | 25444.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
