Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2852 domain-containing protein | GJW30_RS12205 | Not Available | Positive | 2512684 - 2513112 | 16451.5 |
| diguanylate cyclase response regulator | GJW30_RS12210 | Not Available | Positive | 2513316 - 2514305 | 35999.0 |
| hydantoinase b/oxoprolinase family protein | GJW30_RS12215 | Not Available | Negative | 2514250 - 2517912 | 131703.0 |
| trap transporter large permease | GJW30_RS12220 | Not Available | Negative | 2517946 - 2519319 | 48577.7 |
| trap transporter small permease subunit | GJW30_RS12225 | Not Available | Negative | 2519316 - 2519885 | 20879.0 |
| trap transporter substrate-binding protein | GJW30_RS12230 | Not Available | Negative | 2519976 - 2521040 | 37709.5 |
| putative hydro-lyase | GJW30_RS12235 | Not Available | Negative | 2521064 - 2521876 | 29301.3 |
| lysr family transcriptional regulator | GJW30_RS12240 | Not Available | Negative | 2521970 - 2522869 | 33175.5 |
| trap transporter small permease | GJW30_RS12245 | Not Available | Positive | 2523118 - 2523663 | 20330.2 |
| trap transporter large permease | GJW30_RS12250 | Not Available | Positive | 2523666 - 2524973 | 46480.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
