Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | GJW30_RS10920 | Not Available | Positive | 2254730 - 2256028 | 45701.7 |
| hypothetical protein | GJW30_RS10925 | Not Available | Positive | 2256173 - 2256370 | 7333.53 |
| sialic acid trap transporter substrate-binding protein siap | GJW30_RS10930 | Not Available | Positive | 2256485 - 2257462 | 35885.3 |
| trap transporter small permease | GJW30_RS10935 | Not Available | Positive | 2257653 - 2258240 | 22274.3 |
| trap transporter large permease | GJW30_RS10940 | Not Available | Positive | 2258245 - 2259525 | 45983.6 |
| uxaa family hydrolase | GJW30_RS10945 | Not Available | Positive | 2259598 - 2261115 | 53914.1 |
| fumarylacetoacetate hydrolase family protein | GJW30_RS10950 | Not Available | Negative | 2261173 - 2261877 | 25214.5 |
| abc transporter atp-binding protein | GJW30_RS10955 | Not Available | Negative | 2261964 - 2263748 | 64389.2 |
| udp-glucose 4-epimerase gale | GJW30_RS10960 | Not Available | Negative | 2263803 - 2264789 | 35107.6 |
| lipopolysaccharide heptosyltransferase i | GJW30_RS10965 | Not Available | Positive | 2264961 - 2265854 | 31963.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
