Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | GJW30_RS01015 | Not Available | Positive | 222863 - 223687 | 30001.2 |
| radc family protein | GJW30_RS01020 | Not Available | Positive | 223700 - 224401 | 26063.3 |
| ggdef domain-containing protein | GJW30_RS01025 | Not Available | Positive | 224534 - 226243 | 62507.1 |
| nipsnap family protein | GJW30_RS01030 | Not Available | Negative | 226247 - 226858 | 22565.0 |
| sdr family nad(p)-dependent oxidoreductase | GJW30_RS01035 | Not Available | Positive | 227028 - 227783 | 26342.5 |
| dmt family transporter | GJW30_RS01040 | Not Available | Positive | 227783 - 228673 | 32657.9 |
| abc transporter atp-binding protein | GJW30_RS01045 | Not Available | Negative | 228903 - 229970 | 38531.9 |
| 2-hydroxyacid dehydrogenase | GJW30_RS01050 | Not Available | Positive | 230229 - 231200 | 34714.1 |
| apri/inh family metalloprotease inhibitor | GJW30_RS01055 | Not Available | Positive | 231207 - 231875 | 24748.9 |
| mmcb family dna repair protein | GJW30_RS01060 | Not Available | Positive | 231931 - 232422 | 18236.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
