Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| card family transcriptional regulator | GJW30_RS00865 | Not Available | Positive | 194152 - 195069 | 32671.1 |
| type ii toxin-antitoxin system vapc family toxin | GJW30_RS00870 | Not Available | Negative | 195121 - 195540 | 15091.1 |
| type ii toxin-antitoxin system vapb family antitoxin | GJW30_RS00875 | Not Available | Negative | 195543 - 195782 | 9130.95 |
| peptidoglycan-binding protein lysm | GJW30_RS00880 | Not Available | Negative | 195889 - 196335 | 15915.1 |
| m48 family metalloprotease | GJW30_RS00885 | Not Available | Negative | 196451 - 197905 | 52082.0 |
| hypothetical protein | GJW30_RS22940 | Not Available | Positive | 198007 - 198750 | 27281.1 |
| aldehyde dehydrogenase family protein | GJW30_RS00895 | Not Available | Positive | 198887 - 200386 | 53196.3 |
| hypothetical protein | GJW30_RS00900 | Not Available | Positive | 200481 - 200897 | 14620.0 |
| tonb-dependent receptor | GJW30_RS00905 | Not Available | Positive | 201002 - 203071 | 75812.7 |
| Trna-arg | Not Available | Not Available | Positive | 203145 - 203221 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
