Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response exonuclease | GJW30_RS09120 | Not Available | Negative | 1863177 - 1864205 | 37541.9 |
| class i sam-dependent dna methyltransferase | GJW30_RS09125 | Not Available | Positive | 1864255 - 1865190 | 33479.7 |
| mapeg family protein | GJW30_RS09130 | Not Available | Positive | 1865215 - 1865610 | 14550.3 |
| ligase-associated dna damage response dexh box helicase | GJW30_RS09135 | Not Available | Positive | 1865649 - 1868192 | 94278.3 |
| ligase-associated dna damage response endonuclease pdem | GJW30_RS09140 | Not Available | Positive | 1868189 - 1868890 | 25142.2 |
| cytochrome p450 | GJW30_RS09145 | Not Available | Negative | 1868894 - 1870168 | 48578.8 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1870362 - 1870772 | Not Available |
| methylglyoxal synthase | GJW30_RS09155 | Not Available | Negative | 1870818 - 1871144 | 11529.2 |
| lytic transglycosylase domain-containing protein | GJW30_RS09160 | Not Available | Negative | 1871193 - 1872104 | 32416.8 |
| n-acetylmuramoyl-l-alanine amidase | GJW30_RS09165 | Not Available | Negative | 1872280 - 1873038 | 27866.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
