Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | GJW30_RS22985 | Not Available | Negative | 1853227 - 1853469 | 8768.11 |
| abc transporter substrate-binding protein | GJW30_RS09070 | Not Available | Negative | 1853503 - 1855098 | 58910.4 |
| adenosylhomocysteinase | GJW30_RS09075 | Not Available | Positive | 1855295 - 1856734 | 52255.0 |
| glycosyltransferase family 2 protein | GJW30_RS09080 | Not Available | Positive | 1856757 - 1857590 | 30903.8 |
| o-antigen ligase family protein | GJW30_RS09085 | Not Available | Positive | 1857701 - 1858846 | 41317.1 |
| duf3551 domain-containing protein | GJW30_RS09090 | Not Available | Positive | 1858949 - 1859224 | 10075.7 |
| duf3551 domain-containing protein | GJW30_RS09095 | Not Available | Positive | 1859228 - 1859506 | 10174.9 |
| mate family efflux transporter | GJW30_RS09105 | Not Available | Negative | 1859794 - 1861053 | 44407.4 |
| duf6460 domain-containing protein | GJW30_RS09110 | Not Available | Negative | 1861191 - 1861472 | 10368.0 |
| cisplatin damage response atp-dependent dna ligase | GJW30_RS09115 | Not Available | Negative | 1861537 - 1863180 | 61293.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
