Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | GJW30_RS00615 | Not Available | Positive | 138992 - 139732 | 26960.7 |
| gdp-mannose 4,6-dehydratase | GJW30_RS00620 | Not Available | Positive | 139887 - 140951 | 40247.6 |
| nad-dependent epimerase/dehydratase family protein | GJW30_RS00625 | Not Available | Positive | 140988 - 141581 | 21361.9 |
| dna topoisomerase ib | GJW30_RS00630 | Not Available | Positive | 141921 - 142979 | 38728.0 |
| ku protein | GJW30_RS00635 | Not Available | Positive | 143023 - 143826 | 30396.4 |
| d-glycero-alpha-d-manno-heptose-1,7- bisphosphate 7-phosphatase | GJW30_RS00640 | Not Available | Positive | 143864 - 144517 | 23356.7 |
| sensor domain-containing diguanylate cyclase | GJW30_RS00645 | Not Available | Negative | 144519 - 146234 | 62158.8 |
| dna ligase d | GJW30_RS00650 | Not Available | Negative | 146407 - 148995 | 94570.7 |
| ku protein | GJW30_RS00655 | Not Available | Negative | 149002 - 149868 | 31943.5 |
| class i sam-dependent methyltransferase | GJW30_RS00660 | Not Available | Positive | 150071 - 150763 | 25374.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
