Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur oxidation c-type cytochrome soxx | GJW30_RS06550 | Not Available | Negative | 1351034 - 1351636 | 22126.4 |
| sulfur oxidation c-type cytochrome soxa | GJW30_RS06555 | Not Available | Negative | 1351648 - 1352463 | 29901.0 |
| mfs transporter | GJW30_RS06560 | Not Available | Positive | 1352637 - 1353851 | 42825.1 |
| alpha-hydroxy acid oxidase | GJW30_RS06565 | Not Available | Negative | 1353848 - 1355002 | 41820.7 |
| hypothetical protein | GJW30_RS22820 | Not Available | Positive | 1355132 - 1355290 | 5684.54 |
| trap transporter large permease | GJW30_RS06570 | Not Available | Negative | 1355311 - 1356648 | 47650.1 |
| trap transporter small permease subunit | GJW30_RS06575 | Not Available | Negative | 1356654 - 1357205 | 20790.9 |
| trap transporter substrate-binding protein | GJW30_RS06580 | Not Available | Negative | 1357232 - 1358329 | 40496.5 |
| class a beta-lactamase | GJW30_RS06585 | Not Available | Negative | 1358517 - 1359398 | 31233.5 |
| ycii family protein | GJW30_RS06590 | Not Available | Positive | 1359589 - 1359972 | 14019.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
