Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system aminomethyltransferase gcvt | GJW30_RS06445 | Not Available | Negative | 1334576 - 1335727 | 41241.6 |
| hypothetical protein | GJW30_RS06450 | Not Available | Negative | 1336117 - 1336761 | 22171.4 |
| gnat family n-acetyltransferase | GJW30_RS06455 | Not Available | Negative | 1336859 - 1337446 | 22401.9 |
| m16 family metallopeptidase | GJW30_RS06460 | Not Available | Negative | 1337459 - 1338730 | 45741.3 |
| threonine synthase | GJW30_RS06465 | Not Available | Negative | 1338727 - 1340139 | 50643.3 |
| antitoxin | GJW30_RS06470 | Not Available | Positive | 1340249 - 1340506 | 9670.23 |
| type ii toxin-antitoxin system vapc family toxin | GJW30_RS06475 | Not Available | Positive | 1340503 - 1340910 | 14861.1 |
| surf1 family protein | GJW30_RS06480 | Not Available | Negative | 1340907 - 1341644 | 26564.3 |
| duf983 domain-containing protein | GJW30_RS06485 | Not Available | Negative | 1341644 - 1342030 | 13499.6 |
| cytochrome c oxidase subunit 3 | GJW30_RS06490 | Not Available | Negative | 1342114 - 1342971 | 31888.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
