Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | GJW30_RS00570 | Not Available | Positive | 127487 - 128035 | 20140.3 |
| dtdp-glucose 4,6-dehydratase | GJW30_RS00575 | Not Available | Positive | 128035 - 129102 | 40005.1 |
| dtdp-4-dehydrorhamnose reductase | GJW30_RS00580 | Not Available | Positive | 129099 - 129977 | 31465.5 |
| porin | GJW30_RS00585 | Not Available | Negative | 130179 - 131699 | 52972.9 |
| recombinase family protein | GJW30_RS00590 | Not Available | Positive | 132063 - 132662 | 22325.3 |
| hypothetical protein | GJW30_RS22470 | Not Available | Positive | 132907 - 133263 | 13100.9 |
| gdp-l-fucose synthase family protein | GJW30_RS00595 | Not Available | Negative | 133365 - 134390 | 37501.0 |
| glycosyltransferase | GJW30_RS00600 | Not Available | Negative | 134402 - 135451 | 39528.9 |
| glycosyltransferase | GJW30_RS00605 | Not Available | Negative | 135452 - 137818 | 87857.9 |
| abc transporter permease | GJW30_RS00610 | Not Available | Positive | 138152 - 138985 | 31273.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
