Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Variibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Variibacter |
| Species | Variibacter gotjawalensis |
| Strain | strain GJW-30 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
875345 bp
Thymine Count
856663 bp
Guanine Count
1397758 bp
Cytosine Count
1456471 bp
Genome Length
4586237 bp
Protein-coding Genes
4421 genes
Non-Coding Genes
68 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | GJW30_RS05705 | Not Available | Positive | 1188685 - 1189980 | 45558.8 |
| type ii 3-dehydroquinate dehydratase | GJW30_RS05710 | Not Available | Positive | 1189994 - 1190458 | 16726.2 |
| hypothetical protein | GJW30_RS05715 | Not Available | Positive | 1190468 - 1191097 | 22417.5 |
| shikimate dehydrogenase | GJW30_RS05720 | Not Available | Positive | 1191135 - 1191962 | 29402.3 |
| nickel-responsive transcriptional regulator nikr | GJW30_RS05725 | Not Available | Negative | 1192347 - 1192751 | 15100.0 |
| tonb-dependent receptor | GJW30_RS05730 | Not Available | Positive | 1193212 - 1195134 | 68966.9 |
| Trna-met | Not Available | Not Available | Positive | 1195467 - 1195542 | Not Available |
| simpl domain-containing protein | GJW30_RS05740 | Not Available | Positive | 1195695 - 1196411 | 24666.6 |
| 3-isopropylmalate dehydratase large subunit | GJW30_RS05745 | Not Available | Positive | 1196551 - 1197954 | 50601.2 |
| antibiotic biosynthesis monooxygenase family protein | GJW30_RS05750 | Not Available | Positive | 1198099 - 1198431 | 12712.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
