Methylorubrum populi strain P-1M

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylorubrum

Description

Methylorubrum populi strain P-1M is a Gram-negative, mesophilic bacterium characterized as a methylotroph, utilizing methanol and other one-carbon compounds as its primary energy source. This species exhibits a rod shape and typically exists in pairs or as single cells. It is a strictly aerobic organism, requiring oxygen for its metabolic processes. Methylorubrum populi strain P-1M does not possess mobility, as it lacks flagella despite their presence in the cell structure. The strain is notable for its unique genetic composition, containing four replicons, which may contribute to its metabolic versatility. With a two-membrane system, Methylorubrum populi strain P-1M is well-adapted to its host-associated habitat, where it can engage in free-living biotic relationships. The optimal growth temperature for this bacterium is 20 °C, aligning with its mesophilic classification. The study of Methylorubrum populi strain P-1M contributes to our understanding of methylotrophic bacteria, which play critical roles in carbon cycling and can influence ecological dynamics within their environments. By utilizing methanol, this strain may help in the degradation of organic matter, thereby affecting the composition of microbial communities and nutrient availability in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylorubrum
SpeciesMethylorubrum populi
Strainstrain P-1M

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Methylorubrum populi strain P-1M
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceMethylotroph
PathogenicityNot Available

Genome Summary

Methylorubrum populi strain P-1M plasmid pMPPM03, complete

Gene Summary

Adenine Count

7551 bp

Thymine Count

7432 bp

Guanine Count

13914 bp

Cytosine Count

13672 bp

Genome Length

42569 bp

Protein-coding Genes

40 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
virb4 family type iv secretion/conjugal transfer atpaseMPPM_RS27445Not AvailableNegative22964 - 2535786475.0
type iv secretion system protein virb3MPPM_RS27450Not AvailableNegative25350 - 2568812546.5
trbc/virb2 family proteinMPPM_RS27455Not AvailableNegative25689 - 2609313697.2
lytic transglycosylase domain-containing proteinMPPM_RS27460Not AvailableNegative26220 - 2696325474.2
hypothetical proteinMPPM_RS27465Not AvailableNegative26991 - 2734113287.7
plasmid replication protein repcMPPM_RS27470Not AvailablePositive28152 - 2946247221.9
helix-turn-helix domain-containing proteinMPPM_RS27475Not AvailableNegative29673 - 3000211569.0
type ii toxin-antitoxin system rele/pare family toxinMPPM_RS27480Not AvailableNegative29986 - 3036614276.9
hypothetical proteinMPPM_RS27485Not AvailablePositive30771 - 3156529003.4
duf932 domain-containing proteinMPPM_RS27490Not AvailablePositive31747 - 3257130748.8

Displaying genes 61 – 70 of 5505 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.