Methylorubrum populi strain P-1M

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylorubrum

Description

Methylorubrum populi strain P-1M is a Gram-negative, mesophilic bacterium characterized as a methylotroph, utilizing methanol and other one-carbon compounds as its primary energy source. This species exhibits a rod shape and typically exists in pairs or as single cells. It is a strictly aerobic organism, requiring oxygen for its metabolic processes. Methylorubrum populi strain P-1M does not possess mobility, as it lacks flagella despite their presence in the cell structure. The strain is notable for its unique genetic composition, containing four replicons, which may contribute to its metabolic versatility. With a two-membrane system, Methylorubrum populi strain P-1M is well-adapted to its host-associated habitat, where it can engage in free-living biotic relationships. The optimal growth temperature for this bacterium is 20 °C, aligning with its mesophilic classification. The study of Methylorubrum populi strain P-1M contributes to our understanding of methylotrophic bacteria, which play critical roles in carbon cycling and can influence ecological dynamics within their environments. By utilizing methanol, this strain may help in the degradation of organic matter, thereby affecting the composition of microbial communities and nutrient availability in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylorubrum
SpeciesMethylorubrum populi
Strainstrain P-1M

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Methylorubrum populi strain P-1M
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceMethylotroph
PathogenicityNot Available

Genome Summary

Methylorubrum populi strain P-1M plasmid pMPPM03, complete

Gene Summary

Adenine Count

7551 bp

Thymine Count

7432 bp

Guanine Count

13914 bp

Cytosine Count

13672 bp

Genome Length

42569 bp

Protein-coding Genes

40 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulator fixjMPPM_RS18710Not AvailableNegative4051560 - 405216821958.0
is5/is1182 family transposaseMPPM_RS18715Not AvailableNegative4052172 - 405371055966.5
universal stress proteinMPPM_RS18720Not AvailablePositive4054156 - 405501630373.3
hd-gyp domain-containing proteinMPPM_RS18725Not AvailablePositive4055200 - 405626438205.6
hybrid sensor histidine kinase/response regulatorMPPM_RS18730Not AvailableNegative4056332 - 405906795214.3
tade/tadg family type iv pilus assembly proteinMPPM_RS18735Not AvailableNegative4059150 - 406057149317.8
tade/tadg family type iv pilus assembly proteinMPPM_RS18740Not AvailableNegative4060766 - 406139522026.6
tade/tadg family type iv pilus assembly proteinMPPM_RS18745Not AvailableNegative4061392 - 406198521535.2
aromatic ring-hydroxylating oxygenase subunit alphaMPPM_RS18750Not AvailablePositive4062482 - 406374147260.0
hybrid-cluster nad(p)-dependent oxidoreductaseMPPM_RS18755Not AvailablePositive4063745 - 406487240711.5

Displaying genes 3891 – 3900 of 5505 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.