Methylorubrum populi strain P-1M

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylorubrum

Description

Methylorubrum populi strain P-1M is a Gram-negative, mesophilic bacterium characterized as a methylotroph, utilizing methanol and other one-carbon compounds as its primary energy source. This species exhibits a rod shape and typically exists in pairs or as single cells. It is a strictly aerobic organism, requiring oxygen for its metabolic processes. Methylorubrum populi strain P-1M does not possess mobility, as it lacks flagella despite their presence in the cell structure. The strain is notable for its unique genetic composition, containing four replicons, which may contribute to its metabolic versatility. With a two-membrane system, Methylorubrum populi strain P-1M is well-adapted to its host-associated habitat, where it can engage in free-living biotic relationships. The optimal growth temperature for this bacterium is 20 °C, aligning with its mesophilic classification. The study of Methylorubrum populi strain P-1M contributes to our understanding of methylotrophic bacteria, which play critical roles in carbon cycling and can influence ecological dynamics within their environments. By utilizing methanol, this strain may help in the degradation of organic matter, thereby affecting the composition of microbial communities and nutrient availability in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylorubrum
SpeciesMethylorubrum populi
Strainstrain P-1M

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Methylorubrum populi strain P-1M
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceMethylotroph
PathogenicityNot Available

Genome Summary

Methylorubrum populi strain P-1M plasmid pMPPM03, complete

Gene Summary

Adenine Count

7551 bp

Thymine Count

7432 bp

Guanine Count

13914 bp

Cytosine Count

13672 bp

Genome Length

42569 bp

Protein-coding Genes

40 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fmdb family zinc ribbon proteinMPPM_RS18060Not AvailableNegative3908344 - 390866111345.5
formamidaseMPPM_RS18065Not AvailableNegative3908664 - 390989344501.9
alpha/beta fold hydrolaseMPPM_RS18070Not AvailableNegative3910061 - 391107737518.6
urea abc transporter atp-binding subunit urteMPPM_RS18075Not AvailableNegative3911090 - 391177924668.3
urea abc transporter atp-binding protein urtdMPPM_RS18080Not AvailableNegative3911856 - 391264429018.1
urea abc transporter permease subunit urtcMPPM_RS18085Not AvailableNegative3912655 - 391382442211.7
urea abc transporter permease subunit urtbMPPM_RS18090Not AvailableNegative3913838 - 391476433022.3
urea abc transporter substrate-binding proteinMPPM_RS18095Not AvailableNegative3914874 - 391613045490.7
atp-binding proteinMPPM_RS18100Not AvailablePositive3916679 - 3919894114135.0
dna-binding response regulatorMPPM_RS18105Not AvailablePositive3919887 - 392079231801.5

Displaying genes 3761 – 3770 of 5505 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.