Methylorubrum populi strain P-1M

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylorubrum

Description

Methylorubrum populi strain P-1M is a Gram-negative, mesophilic bacterium characterized as a methylotroph, utilizing methanol and other one-carbon compounds as its primary energy source. This species exhibits a rod shape and typically exists in pairs or as single cells. It is a strictly aerobic organism, requiring oxygen for its metabolic processes. Methylorubrum populi strain P-1M does not possess mobility, as it lacks flagella despite their presence in the cell structure. The strain is notable for its unique genetic composition, containing four replicons, which may contribute to its metabolic versatility. With a two-membrane system, Methylorubrum populi strain P-1M is well-adapted to its host-associated habitat, where it can engage in free-living biotic relationships. The optimal growth temperature for this bacterium is 20 °C, aligning with its mesophilic classification. The study of Methylorubrum populi strain P-1M contributes to our understanding of methylotrophic bacteria, which play critical roles in carbon cycling and can influence ecological dynamics within their environments. By utilizing methanol, this strain may help in the degradation of organic matter, thereby affecting the composition of microbial communities and nutrient availability in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylorubrum
SpeciesMethylorubrum populi
Strainstrain P-1M

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Methylorubrum populi strain P-1M
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceMethylotroph
PathogenicityNot Available

Genome Summary

Methylorubrum populi strain P-1M plasmid pMPPM03, complete

Gene Summary

Adenine Count

7551 bp

Thymine Count

7432 bp

Guanine Count

13914 bp

Cytosine Count

13672 bp

Genome Length

42569 bp

Protein-coding Genes

40 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgMPPM_RS08745Not AvailableNegative1904016 - 190589066572.7
duf6894 family proteinMPPM_RS08750Not AvailableNegative1906109 - 19063759634.19
pas domain-containing proteinMPPM_RS08755Not AvailablePositive1906752 - 190777437670.9
trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnmeMPPM_RS08760Not AvailableNegative1907787 - 190912145991.7
leucine--trna ligaseMPPM_RS08765Not AvailableNegative1909198 - 191183797967.9
duf1963 domain-containing proteinMPPM_RS08770Not AvailableNegative1911960 - 191302738802.8
yggs family pyridoxal phosphate-dependent enzymeMPPM_RS08775Not AvailablePositive1913139 - 191390327504.8
l,d-transpeptidase family proteinMPPM_RS08780Not AvailableNegative1913934 - 191452121561.2
response regulator transcription factorMPPM_RS08785Not AvailablePositive1914822 - 191550825418.5
crp/fnr family transcriptional regulatorMPPM_RS08790Not AvailablePositive1915730 - 191619716716.3

Displaying genes 1891 – 1900 of 5505 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.