Methylorubrum populi strain P-1M

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylorubrum

Description

Methylorubrum populi strain P-1M is a Gram-negative, mesophilic bacterium characterized as a methylotroph, utilizing methanol and other one-carbon compounds as its primary energy source. This species exhibits a rod shape and typically exists in pairs or as single cells. It is a strictly aerobic organism, requiring oxygen for its metabolic processes. Methylorubrum populi strain P-1M does not possess mobility, as it lacks flagella despite their presence in the cell structure. The strain is notable for its unique genetic composition, containing four replicons, which may contribute to its metabolic versatility. With a two-membrane system, Methylorubrum populi strain P-1M is well-adapted to its host-associated habitat, where it can engage in free-living biotic relationships. The optimal growth temperature for this bacterium is 20 °C, aligning with its mesophilic classification. The study of Methylorubrum populi strain P-1M contributes to our understanding of methylotrophic bacteria, which play critical roles in carbon cycling and can influence ecological dynamics within their environments. By utilizing methanol, this strain may help in the degradation of organic matter, thereby affecting the composition of microbial communities and nutrient availability in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylorubrum
SpeciesMethylorubrum populi
Strainstrain P-1M

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Methylorubrum populi strain P-1M
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceMethylotroph
PathogenicityNot Available

Genome Summary

Methylorubrum populi strain P-1M plasmid pMPPM03, complete

Gene Summary

Adenine Count

7551 bp

Thymine Count

7432 bp

Guanine Count

13914 bp

Cytosine Count

13672 bp

Genome Length

42569 bp

Protein-coding Genes

40 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna (adenine(2030)-n(6))-methyltransferase rlmjMPPM_RS04650Not AvailablePositive1002610 - 100341629625.7
duf6894 family proteinMPPM_RS04655Not AvailableNegative1003433 - 10037029866.45
hypothetical proteinMPPM_RS04660Not AvailableNegative1003763 - 10039997368.86
fad-linked oxidase c-terminal domain-containing proteinMPPM_RS04665Not AvailableNegative1004102 - 100553550227.3
c-type cytochromeMPPM_RS04670Not AvailablePositive1005912 - 100627412620.3
marr family winged helix-turn-helix transcriptional regulatorMPPM_RS04675Not AvailableNegative1006370 - 100685517833.5
hypothetical proteinMPPM_RS04680Not AvailableNegative1007256 - 100786420690.7
duf1214 domain-containing proteinMPPM_RS04685Not AvailableNegative1007861 - 100856824479.0
transglycosylase domain-containing proteinMPPM_RS04690Not AvailableNegative1008578 - 101084581696.2
ycgn family cysteine cluster proteinMPPM_RS04695Not AvailablePositive1011185 - 101164917355.5

Displaying genes 1081 – 1090 of 5505 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.