Paucilactobacillus hokkaidonensis JCM 18461 strain LOOC260

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Paucilactobacillus

Description

Paucilactobacillus hokkaidonensis JCM 18461 strain LOOC260 is characterized by having two replicons, which indicates a complex genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under two specific accession numbers: NZ_AP014681.1 and NZ_AP014682.1, which provide a reference for researchers seeking genomic information and further insights into its genetic makeup. Given its classification within the Paucilactobacillus genus, this strain is likely to be associated with lactic acid fermentation processes. Such bacteria are known for their role in food production and preservation, particularly in fermented dairy products and plant-based foods. The presence of two replicons might suggest a potential for enhanced metabolic flexibility, allowing the strain to thrive under diverse conditions. The ecological significance of Paucilactobacillus hokkaidonensis JCM 18461 strain LOOC260 may include its contribution to the microbiome of fermented foods, influencing flavor profiles and preservation qualities. Additionally, the strain could play a role in gut health, as many lactic acid bacteria are recognized for their probiotic benefits. The dual replicon structure may further enhance its survival and functionality in competitive microbial environments, making it a noteworthy subject for further research in microbiology and biotechnology applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusPaucilactobacillus
SpeciesPaucilactobacillus hokkaidonensis
StrainJCM 18461 strain LOOC260

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paucilactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

95 genes

Non-Coding Genes

7 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2273 domain-containing proteinLOOC260_RS11370Not AvailableNegative55310 - 554956812.92
alkaline shock response membrane anchor protein amapLOOC260_RS11375Not AvailableNegative55507 - 5606721176.4
recombinase family proteinLOOC260_RS11380Not AvailablePositive56265 - 5684922423.3
nad(p)/fad-dependent oxidoreductaseLOOC260_RS11385Not AvailablePositive57209 - 5841444579.9
fad-dependent oxidoreductaseLOOC260_RS11390Not AvailablePositive58530 - 5990650492.1
is3 family transposaseLOOC260_RS11395Not AvailableNegative60126 - 6093231177.9
recombinase family proteinLOOC260_RS11400Not AvailablePositive60962 - 6159124341.6
ribose-5-phosphate isomerase rpiaLOOC260_RS11405Not AvailableNegative62200 - 6291325502.6
is5 family transposaseLOOC260_RS12145Not AvailablePositive63498 - 6429630974.5
is5 family transposaseLOOC260_RS12150Not AvailableNegative64316 - 6510330311.7

Displaying genes 71 – 80 of 149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.