Paucilactobacillus hokkaidonensis JCM 18461 strain LOOC260

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Paucilactobacillus

Description

Paucilactobacillus hokkaidonensis JCM 18461 strain LOOC260 is characterized by having two replicons, which indicates a complex genomic structure that may contribute to its adaptability in various environments. The strain is cataloged under two specific accession numbers: NZ_AP014681.1 and NZ_AP014682.1, which provide a reference for researchers seeking genomic information and further insights into its genetic makeup. Given its classification within the Paucilactobacillus genus, this strain is likely to be associated with lactic acid fermentation processes. Such bacteria are known for their role in food production and preservation, particularly in fermented dairy products and plant-based foods. The presence of two replicons might suggest a potential for enhanced metabolic flexibility, allowing the strain to thrive under diverse conditions. The ecological significance of Paucilactobacillus hokkaidonensis JCM 18461 strain LOOC260 may include its contribution to the microbiome of fermented foods, influencing flavor profiles and preservation qualities. Additionally, the strain could play a role in gut health, as many lactic acid bacteria are recognized for their probiotic benefits. The dual replicon structure may further enhance its survival and functionality in competitive microbial environments, making it a noteworthy subject for further research in microbiology and biotechnology applications.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusPaucilactobacillus
SpeciesPaucilactobacillus hokkaidonensis
StrainJCM 18461 strain LOOC260

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paucilactobacillus hokkaidonensis JCM 18461 strain LOOC260 plasmid

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

95 genes

Non-Coding Genes

7 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer protein trbl family proteinLOOC260_RS11620Not AvailablePositive15604 - 1644331100.6
hypothetical proteinLOOC260_RS11625Not AvailablePositive16459 - 1686916187.8
type ia dna topoisomeraseLOOC260_RS11630Not AvailablePositive16876 - 1901180040.2
hypothetical proteinLOOC260_RS11635Not AvailablePositive19133 - 193487852.33
ardc-like ssdna-binding domain-containing proteinLOOC260_RS11640Not AvailablePositive19352 - 2047642087.6
restriction endonuclease subunit sLOOC260_RS11960Not AvailableNegative20556 - 2163241103.7
hsdm family class i sam-dependent methyltransferaseLOOC260_RS11650Not AvailableNegative21616 - 2354773057.4
arsr/smtb family transcription factorLOOC260_RS11655Not AvailableNegative23733 - 2404411950.6
nuclear transport factor 2 family proteinLOOC260_RS11660Not AvailablePositive24113 - 2447514022.6
recombinase family proteinLOOC260_RS11665Not AvailablePositive24580 - 2516422390.3

Displaying genes 121 – 130 of 149 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.