Thioploca ingrica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thioploca

Description

Thioploca ingrica is a bacterial species characterized by a single replicon, indicating a streamlined genetic structure. This organism is cataloged under the accession number NZ_AP014633.1, which allows for its identification and study within genomic databases. Thioploca ingrica is known for its ecological role in marine environments, particularly in sulfur-rich habitats. It is part of a group of bacteria that are capable of utilizing sulfur compounds, which plays a crucial role in biogeochemical cycles. By participating in the oxidation of sulfide and the reduction of sulfate, Thioploca ingrica contributes to the cycling of sulfur in sedimentary environments. This bacterium is particularly interesting due to its potential applications in bioremediation and ecological studies. Its unique metabolic pathways could be leveraged to understand sulfur cycling in various ecosystems, including those impacted by anthropogenic activities. The study of Thioploca ingrica, as evidenced by its genomic data, provides insights into the adaptation of microorganisms to specific ecological niches, highlighting the importance of microbial diversity in maintaining ecosystem health. In summary, Thioploca ingrica represents a significant player in the microbial ecology of sulfur-rich marine environments, with implications for both environmental science and microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThioploca
SpeciesThioploca ingrica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioploca ingrica DNA, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3947 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit nuofTHII_RS02645Not AvailablePositive616493 - 61776446233.4
abc transporter substrate-binding proteinTHII_RS02650Not AvailablePositive617927 - 61855024341.2
abc transporter substrate-binding proteinTHII_RS20980Not AvailableNegative619099 - 6193267889.79
sulfotransferase family proteinTHII_RS02655Not AvailablePositive620599 - 62143232427.0
duf2283 domain-containing proteinTHII_RS02660Not AvailablePositive621682 - 6219429512.43
duf29 domain-containing proteinTHII_RS02665Not AvailablePositive622089 - 62254117719.1
isocitrate lyaseTHII_RS02670Not AvailableNegative622660 - 62397648425.7
malate synthase aTHII_RS02675Not AvailableNegative624018 - 62562560724.8
sigma factor-like helix-turn-helix dna-binding proteinTHII_RS02680Not AvailablePositive626397 - 62812466005.5
uma2 family endonucleaseTHII_RS02685Not AvailablePositive628333 - 62885720011.1

Displaying genes 541 – 550 of 4001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.