Thioploca ingrica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thioploca

Description

Thioploca ingrica is a bacterial species characterized by a single replicon, indicating a streamlined genetic structure. This organism is cataloged under the accession number NZ_AP014633.1, which allows for its identification and study within genomic databases. Thioploca ingrica is known for its ecological role in marine environments, particularly in sulfur-rich habitats. It is part of a group of bacteria that are capable of utilizing sulfur compounds, which plays a crucial role in biogeochemical cycles. By participating in the oxidation of sulfide and the reduction of sulfate, Thioploca ingrica contributes to the cycling of sulfur in sedimentary environments. This bacterium is particularly interesting due to its potential applications in bioremediation and ecological studies. Its unique metabolic pathways could be leveraged to understand sulfur cycling in various ecosystems, including those impacted by anthropogenic activities. The study of Thioploca ingrica, as evidenced by its genomic data, provides insights into the adaptation of microorganisms to specific ecological niches, highlighting the importance of microbial diversity in maintaining ecosystem health. In summary, Thioploca ingrica represents a significant player in the microbial ecology of sulfur-rich marine environments, with implications for both environmental science and microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThioploca
SpeciesThioploca ingrica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioploca ingrica DNA, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3947 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hsp20/alpha crystallin family proteinTHII_RS01765Not AvailableNegative401226 - 40167216831.0
sensor histidine kinaseTHII_RS01770Not AvailablePositive402196 - 40428678958.3
agmatine deiminaseTHII_RS01775Not AvailablePositive404303 - 40533138401.7
uma2 family endonucleaseTHII_RS01780Not AvailablePositive405365 - 40603625567.7
n-carbamoylputrescine amidaseTHII_RS01785Not AvailablePositive406056 - 40693132700.9
hybrid sensor histidine kinase/response regulatorTHII_RS01790Not AvailablePositive407149 - 40826741851.0
flotillin family proteinTHII_RS01795Not AvailableNegative408584 - 41047669493.0
yqij family proteinTHII_RS01800Not AvailableNegative410498 - 41116324012.8
hypothetical proteinTHII_RS01805Not AvailableNegative411392 - 4116319092.92
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseTHII_RS01810Not AvailableNegative411643 - 41212817232.0

Displaying genes 361 – 370 of 4001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.