Thioploca ingrica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thioploca

Description

Thioploca ingrica is a bacterial species characterized by a single replicon, indicating a streamlined genetic structure. This organism is cataloged under the accession number NZ_AP014633.1, which allows for its identification and study within genomic databases. Thioploca ingrica is known for its ecological role in marine environments, particularly in sulfur-rich habitats. It is part of a group of bacteria that are capable of utilizing sulfur compounds, which plays a crucial role in biogeochemical cycles. By participating in the oxidation of sulfide and the reduction of sulfate, Thioploca ingrica contributes to the cycling of sulfur in sedimentary environments. This bacterium is particularly interesting due to its potential applications in bioremediation and ecological studies. Its unique metabolic pathways could be leveraged to understand sulfur cycling in various ecosystems, including those impacted by anthropogenic activities. The study of Thioploca ingrica, as evidenced by its genomic data, provides insights into the adaptation of microorganisms to specific ecological niches, highlighting the importance of microbial diversity in maintaining ecosystem health. In summary, Thioploca ingrica represents a significant player in the microbial ecology of sulfur-rich marine environments, with implications for both environmental science and microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThioploca
SpeciesThioploca ingrica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioploca ingrica DNA, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3947 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sirb2 family proteinTHII_RS16500Not AvailableNegative4004605 - 400498514548.6
uracil-dna glycosylase family proteinTHII_RS16505Not AvailableNegative4005106 - 400594832959.1
duf349 domain-containing proteinTHII_RS16510Not AvailableNegative4006462 - 4009737127724.0
ef-hand domain-containing proteinTHII_RS16515Not AvailablePositive4010406 - 401123030361.9
hypothetical proteinTHII_RS16520Not AvailablePositive4011494 - 401179911303.8
secondary thiamine-phosphate synthase enzyme yjbqTHII_RS16525Not AvailablePositive4012136 - 401254315228.3
recombination-associated protein rdgcTHII_RS16530Not AvailablePositive4012582 - 401351135350.6
rpn family recombination-promoting nuclease/putative transposaseTHII_RS16535Not AvailablePositive4013595 - 401462339910.9
choice-of-anchor d domain-containing proteinTHII_RS16540Not AvailableNegative4014690 - 4019471163198.0
choice-of-anchor d domain-containing proteinTHII_RS16545Not AvailableNegative4019957 - 402214378732.8

Displaying genes 3361 – 3370 of 4001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.