Thioploca ingrica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thioploca

Description

Thioploca ingrica is a bacterial species characterized by a single replicon, indicating a streamlined genetic structure. This organism is cataloged under the accession number NZ_AP014633.1, which allows for its identification and study within genomic databases. Thioploca ingrica is known for its ecological role in marine environments, particularly in sulfur-rich habitats. It is part of a group of bacteria that are capable of utilizing sulfur compounds, which plays a crucial role in biogeochemical cycles. By participating in the oxidation of sulfide and the reduction of sulfate, Thioploca ingrica contributes to the cycling of sulfur in sedimentary environments. This bacterium is particularly interesting due to its potential applications in bioremediation and ecological studies. Its unique metabolic pathways could be leveraged to understand sulfur cycling in various ecosystems, including those impacted by anthropogenic activities. The study of Thioploca ingrica, as evidenced by its genomic data, provides insights into the adaptation of microorganisms to specific ecological niches, highlighting the importance of microbial diversity in maintaining ecosystem health. In summary, Thioploca ingrica represents a significant player in the microbial ecology of sulfur-rich marine environments, with implications for both environmental science and microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThioploca
SpeciesThioploca ingrica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioploca ingrica DNA, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3947 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-phosphoerythronate dehydrogenase pdxbTHII_RS13890Not AvailablePositive3373077 - 337421942146.2
type ii secretion system proteinTHII_RS13895Not AvailableNegative3374265 - 337484621714.2
ubih/ubif/visc/coq6 family ubiquinone biosynthesis hydroxylaseTHII_RS13900Not AvailablePositive3375007 - 337628447254.9
bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyaseTHII_RS13905Not AvailablePositive3376361 - 337717630638.4
duf2511 domain-containing proteinTHII_RS20530Not AvailablePositive3377300 - 337874255672.9
duf2202 domain-containing proteinTHII_RS13915Not AvailablePositive3378827 - 337964831804.5
duf2784 domain-containing proteinTHII_RS13920Not AvailableNegative3379682 - 338009515543.2
d-aminoacyl-trna deacylaseTHII_RS13925Not AvailableNegative3380097 - 338054616437.2
ssra-binding protein smpbTHII_RS13930Not AvailableNegative3380543 - 338101018085.1
type ii toxin-antitoxin system rata family toxinTHII_RS13935Not AvailablePositive3381402 - 338179114424.4

Displaying genes 2831 – 2840 of 4001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.