Thioploca ingrica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thioploca

Description

Thioploca ingrica is a bacterial species characterized by a single replicon, indicating a streamlined genetic structure. This organism is cataloged under the accession number NZ_AP014633.1, which allows for its identification and study within genomic databases. Thioploca ingrica is known for its ecological role in marine environments, particularly in sulfur-rich habitats. It is part of a group of bacteria that are capable of utilizing sulfur compounds, which plays a crucial role in biogeochemical cycles. By participating in the oxidation of sulfide and the reduction of sulfate, Thioploca ingrica contributes to the cycling of sulfur in sedimentary environments. This bacterium is particularly interesting due to its potential applications in bioremediation and ecological studies. Its unique metabolic pathways could be leveraged to understand sulfur cycling in various ecosystems, including those impacted by anthropogenic activities. The study of Thioploca ingrica, as evidenced by its genomic data, provides insights into the adaptation of microorganisms to specific ecological niches, highlighting the importance of microbial diversity in maintaining ecosystem health. In summary, Thioploca ingrica represents a significant player in the microbial ecology of sulfur-rich marine environments, with implications for both environmental science and microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThioploca
SpeciesThioploca ingrica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thioploca ingrica DNA, complete genome.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3947 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pas domain s-box proteinTHII_RS19995Not AvailablePositive1256129 - 1261573208105.0
sensor histidine kinaseTHII_RS05115Not AvailablePositive1261841 - 126296241784.5
5-(carboxyamino)imidazole ribonucleotide mutaseTHII_RS05120Not AvailableNegative1262971 - 126348618113.3
5-(carboxyamino)imidazole ribonucleotide synthaseTHII_RS05125Not AvailableNegative1263479 - 126464242167.6
m4 family metallopeptidaseTHII_RS05130Not AvailablePositive1265222 - 126721374552.8
hypothetical proteinTHII_RS05135Not AvailableNegative1267287 - 126785021643.8
hypothetical proteinTHII_RS05140Not AvailableNegative1267862 - 126891441136.9
general secretion pathway protein gspkTHII_RS05145Not AvailableNegative1268865 - 127003444268.7
prepilin-type n-terminal cleavage/methylation domain-containing proteinTHII_RS05150Not AvailableNegative1270062 - 127069424677.7
type iv pilus modification pilv family proteinTHII_RS20000Not AvailableNegative1270681 - 127109715468.8

Displaying genes 1041 – 1050 of 4001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.