Caballeronia cordobensis strain RPE67

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Caballeronia

Description

Caballeronia cordobensis strain RPE67 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses a unique genomic structure, containing four replicons, which may play a role in its adaptability and genetic diversity. The strain is cataloged under multiple accessions, specifically NZ_AP014576.1, NZ_AP014577.1, NZ_AP014578.1, and NZ_AP014580.1, indicating a well-documented genetic profile. The presence of four replicons suggests a complex genomic architecture that can be advantageous for the organism in various environments. Such a structure may facilitate the maintenance of multiple plasmids or genomic islands, potentially aiding in horizontal gene transfer, which is a crucial factor in the evolution of bacterial species, particularly in response to environmental challenges. Understanding the traits of Caballeronia cordobensis strain RPE67 can provide insights into its ecological role. As a member of the Caballeronia genus, this strain may be involved in interactions with plant systems, possibly contributing to plant growth or health through mechanisms that are common among similar bacteria. The ecological implications of its genetic capabilities could extend to its potential involvement in nutrient cycling or symbiotic relationships in various ecosystems. Overall, the traits of strain RPE67 highlight its significance in microbiological research and its potential applications in agriculture or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCaballeronia
SpeciesCaballeronia cordobensis
Strainstrain RPE67

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caballeronia cordobensis strain RPE67 chromosome 1, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2860 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh:flavin oxidoreductase/nadh oxidaseBRPE67_RS13890Not AvailableNegative2948949 - 295006139938.7
glutamine amidotransferaseBRPE67_RS13895Not AvailableNegative2950150 - 295087826361.6
marr family winged helix-turn-helix transcriptional regulatorBRPE67_RS13900Not AvailableNegative2951037 - 295168123653.5
ybdk family carboxylate-amine ligaseBRPE67_RS13905Not AvailableNegative2952409 - 295352141523.4
cation:proton antiporterBRPE67_RS13910Not AvailableNegative2953565 - 295476742886.9
bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmcBRPE67_RS13915Not AvailableNegative2955593 - 295740165463.9
vtt domain-containing proteinBRPE67_RS13920Not AvailableNegative2957453 - 295831330198.2
hu family dna-binding proteinBRPE67_RS13925Not AvailablePositive2958776 - 29590549591.59
gtp-binding proteinBRPE67_RS13930Not AvailableNegative2959136 - 296040446174.8
lytic transglycosylase domain-containing proteinBRPE67_RS13935Not AvailableNegative2960541 - 296098416414.8

Displaying genes 2811 – 2820 of 6698 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.