Caballeronia cordobensis strain RPE67

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Caballeronia

Description

Caballeronia cordobensis strain RPE67 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses a unique genomic structure, containing four replicons, which may play a role in its adaptability and genetic diversity. The strain is cataloged under multiple accessions, specifically NZ_AP014576.1, NZ_AP014577.1, NZ_AP014578.1, and NZ_AP014580.1, indicating a well-documented genetic profile. The presence of four replicons suggests a complex genomic architecture that can be advantageous for the organism in various environments. Such a structure may facilitate the maintenance of multiple plasmids or genomic islands, potentially aiding in horizontal gene transfer, which is a crucial factor in the evolution of bacterial species, particularly in response to environmental challenges. Understanding the traits of Caballeronia cordobensis strain RPE67 can provide insights into its ecological role. As a member of the Caballeronia genus, this strain may be involved in interactions with plant systems, possibly contributing to plant growth or health through mechanisms that are common among similar bacteria. The ecological implications of its genetic capabilities could extend to its potential involvement in nutrient cycling or symbiotic relationships in various ecosystems. Overall, the traits of strain RPE67 highlight its significance in microbiological research and its potential applications in agriculture or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusCaballeronia
SpeciesCaballeronia cordobensis
Strainstrain RPE67

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caballeronia cordobensis strain RPE67 chromosome 1, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2860 genes

Non-Coding Genes

84 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molybdopterin-synthase adenylyltransferase moebBRPE67_RS00960Not AvailableNegative198791 - 19955526932.3
s41 family peptidaseBRPE67_RS00965Not AvailableNegative199659 - 20124257565.4
2,3-diphosphoglycerate-dependent phosphoglycerate mutaseBRPE67_RS00970Not AvailableNegative201474 - 20222027926.3
rhodanese-like domain-containing proteinBRPE67_RS00975Not AvailablePositive202405 - 20283015004.3
glutaredoxin 3BRPE67_RS00980Not AvailablePositive202827 - 2030879671.86
protein-export chaperone secbBRPE67_RS00985Not AvailablePositive203157 - 20362717029.3
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseBRPE67_RS00990Not AvailablePositive203659 - 20465734317.5
o-acetyl-adp-ribose deacetylaseBRPE67_RS00995Not AvailablePositive204676 - 20519117995.7
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlBRPE67_RS01000Not AvailableNegative205188 - 20565817306.6
phosphoribosyltransferase family proteinBRPE67_RS01005Not AvailableNegative205690 - 20647528610.6

Displaying genes 221 – 230 of 6698 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.