Phycisphaeraceae bacterium

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Phycisphaerales

Family

Phycisphaeraceae

Genus

Description

Phycisphaeraceae bacterium is characterized by having three distinct replicons, which suggests a complex genomic organization that may facilitate diverse metabolic pathways. The organism is cataloged under several accessions, including NYZC00000000.1, PAIY00000000.1, and PBAS00000000.1, which represent different genomic sequences associated with this bacterium. This family of bacteria, Phycisphaeraceae, is often associated with aquatic environments, reflecting an ecological niche that may have implications for nutrient cycling in those systems. The presence of multiple replicons could indicate an adaptation to varying environmental conditions, allowing the bacterium to thrive in complex habitats. While specific metabolic capabilities or interactions with other microorganisms are not provided, the genomic diversity suggested by the three replicons may enable the bacterium to participate in essential ecological functions, such as the decomposition of organic matter or the cycling of nutrients in aquatic ecosystems. Understanding the genomic structure of Phycisphaeraceae bacterium is crucial as it may reveal insights into its ecological role and potential applications in biotechnology, particularly in bioremediation or biomass production. Overall, the traits of this organism point to its potential importance in maintaining the health and functionality of its aquatic environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Phycisphaeraceae bacterium isolate SP4387

Gene Summary

Adenine Count

825010 bp

Thymine Count

822038 bp

Guanine Count

842688 bp

Cytosine Count

864191 bp

Genome Length

3354005 bp

Protein-coding Genes

2789 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylglucosamine 2-epimerase (hydrolyzing)CMJ19_06415Not AvailablePositive1592930 - 159407841078.2
hypothetical proteinCMJ19_06420Not AvailablePositive1594303 - 159498624834.3
hypothetical proteinCMJ19_06425Not AvailableNegative1594991 - 159607939310.9
Trna-thrNot AvailableNot AvailablePositive1596506 - 1596577Not Available
Trna-thrNot AvailableNot AvailablePositive1596623 - 1596695Not Available
hypothetical proteinCMJ19_06445Not AvailablePositive1598213 - 159914534949.2
hypothetical proteinCMJ19_06450Not AvailableNegative1599152 - 15993407084.64
hypothetical proteinCMJ19_06455Not AvailablePositive1599469 - 160056940044.9
hypothetical proteinCMJ19_06460Not AvailablePositive1600674 - 160141127220.8
udp-glucose 6-dehydrogenaseCMJ19_06465Not AvailableNegative1601505 - 160285749216.8

Displaying genes 9761 – 9770 of 13495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.