Phycisphaeraceae bacterium

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Phycisphaerales

Family

Phycisphaeraceae

Genus

Description

Phycisphaeraceae bacterium is characterized by having three distinct replicons, which suggests a complex genomic organization that may facilitate diverse metabolic pathways. The organism is cataloged under several accessions, including NYZC00000000.1, PAIY00000000.1, and PBAS00000000.1, which represent different genomic sequences associated with this bacterium. This family of bacteria, Phycisphaeraceae, is often associated with aquatic environments, reflecting an ecological niche that may have implications for nutrient cycling in those systems. The presence of multiple replicons could indicate an adaptation to varying environmental conditions, allowing the bacterium to thrive in complex habitats. While specific metabolic capabilities or interactions with other microorganisms are not provided, the genomic diversity suggested by the three replicons may enable the bacterium to participate in essential ecological functions, such as the decomposition of organic matter or the cycling of nutrients in aquatic ecosystems. Understanding the genomic structure of Phycisphaeraceae bacterium is crucial as it may reveal insights into its ecological role and potential applications in biotechnology, particularly in bioremediation or biomass production. Overall, the traits of this organism point to its potential importance in maintaining the health and functionality of its aquatic environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Phycisphaeraceae bacterium isolate SP4387

Gene Summary

Adenine Count

825010 bp

Thymine Count

822038 bp

Guanine Count

842688 bp

Cytosine Count

864191 bp

Genome Length

3354005 bp

Protein-coding Genes

2789 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam proteinCMJ18_24680Not AvailableNegative6791489 - 679282048690.9
hypothetical proteinCMJ18_24685Not AvailableNegative6792834 - 679330115995.8
serine dehydrataseCMJ18_24690Not AvailableNegative6793390 - 679433432785.4
hypothetical proteinCMJ18_24695Not AvailableNegative6794377 - 6797862124534.0
preprotein translocase subunit yajcCMJ18_24700Not AvailableNegative6798010 - 679838413281.1
trna guanosine(34) transglycosylase tgtCMJ18_24705Not AvailableNegative6798570 - 679973342289.1
2-deoxy-d-gluconate 3-dehydrogenaseCMJ18_24710Not AvailableNegative6799803 - 680057326888.3
hypothetical proteinCMJ18_24715Not AvailableNegative6800627 - 680149932463.8
nudix domain-containing proteinCMJ18_24720Not AvailableNegative6801499 - 680204420453.4
hypothetical proteinCMJ18_24725Not AvailableNegative6802273 - 6805098104695.0

Displaying genes 7751 – 7760 of 13495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.