Phycisphaeraceae bacterium

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Phycisphaerae

Order

Phycisphaerales

Family

Phycisphaeraceae

Genus

Description

Phycisphaeraceae bacterium is characterized by having three distinct replicons, which suggests a complex genomic organization that may facilitate diverse metabolic pathways. The organism is cataloged under several accessions, including NYZC00000000.1, PAIY00000000.1, and PBAS00000000.1, which represent different genomic sequences associated with this bacterium. This family of bacteria, Phycisphaeraceae, is often associated with aquatic environments, reflecting an ecological niche that may have implications for nutrient cycling in those systems. The presence of multiple replicons could indicate an adaptation to varying environmental conditions, allowing the bacterium to thrive in complex habitats. While specific metabolic capabilities or interactions with other microorganisms are not provided, the genomic diversity suggested by the three replicons may enable the bacterium to participate in essential ecological functions, such as the decomposition of organic matter or the cycling of nutrients in aquatic ecosystems. Understanding the genomic structure of Phycisphaeraceae bacterium is crucial as it may reveal insights into its ecological role and potential applications in biotechnology, particularly in bioremediation or biomass production. Overall, the traits of this organism point to its potential importance in maintaining the health and functionality of its aquatic environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Phycisphaeraceae bacterium isolate SP4387

Gene Summary

Adenine Count

825010 bp

Thymine Count

822038 bp

Guanine Count

842688 bp

Cytosine Count

864191 bp

Genome Length

3354005 bp

Protein-coding Genes

2789 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional folylpolyglutamate synthase/dihydrofolate synthaseCMJ18_16245Not AvailablePositive4474696 - 447621655058.7
trna dihydrouridine synthase dusbCMJ18_16250Not AvailablePositive4476227 - 447725537364.5
hypothetical proteinCMJ18_16255Not AvailableNegative4477360 - 447831335454.4
glycosyl transferaseCMJ18_16260Not AvailablePositive4478770 - 448006547728.0
nad-dependent epimerase/dehydratase family proteinCMJ18_16265Not AvailablePositive4480101 - 448134246330.2
hypothetical proteinCMJ18_16270Not AvailablePositive4481487 - 448304653938.3
mechanosensitive ion channel proteinCMJ18_16275Not AvailablePositive4483169 - 448414334280.6
thymidylate kinaseCMJ18_16280Not AvailableNegative4484425 - 448518327877.8
phytanoyl-coa dioxygenase family proteinCMJ18_16285Not AvailablePositive4485182 - 448602432145.1
hypothetical proteinCMJ18_16290Not AvailablePositive4486168 - 448785363317.0

Displaying genes 6081 – 6090 of 13495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.